Below is a collection of NetAffx annotation information which is stored in a single file for each array type. This information is updated quarterly. These files are for use by any interested party to understand what biological entities are represented on Affymetrix arrays. Software Developers who are interested in programmatic access and updates to NetAffx information should learn about the NetAffx SDK .
free
evaluation version of WinZip. Then, download the zipped files
to your hard drive using the links below and double click on the
downloaded file to open WinZip and begin the installation.download the program and double click on the Affymetrix file you wish to access. The manager will allow you to speed up, schedule and pause/resume any downloads from the site.
Bovine 10K Panel Annotations (444 KB, 6/15/06)
Bovine_25KPanel_R3 Annotations, CSV format (1.9 MB, 7/9/08)
DMET_Panel Annotations, CSV format (271 KB, 7/9/08)
GC Content Data, NCBI Build 36, TSV Format (146 KB, 1/2/07)
GC Content Data, NCBI Build 36, TSV Format (3.5 MB, 1/2/07)
GC Content Data, NCBI Build 36, TSV Format (3.8 MB, 1/2/07)
GC Content Data, NCBI Build 36, TSV Format (806 KB, 1/2/07)
GC Content Data, NCBI Build 36, TSV Format (895 KB, 1/2/07)
GenomeWideSNP_5 Annotations, CSV format (146 MB , 7/9/08)
GenomeWideSNP_6 Annotations, CSV format (306 MB , 7/9/08)
HuGeneFocused50K Annotations, CSV format (14 MB , 7/9/08)
HuGenomeWide50K Annotations, CSV format (9.0 MB, 7/9/08)
Human (Panels 1 and 2) 20K cSNP Panel Annotations (2.1 MB, 6/23/06)
Immune_and_Inflam_9KPanel_R1.5 Annotations, CSV format (2.6 MB, 7/9/08)
MALD 3K Panel Annotations (220 KB, 6/15/06)
Mapping10K_Xba142 Annotations, CSV format (3.3 MB, 7/9/08)
Mapping250K_Nsp Annotations, CSV format (87 MB , 7/9/08)
Mapping250K_Sty Annotations, CSV format (81 MB , 7/9/08)
Mapping50K_Hind240 Annotations, CSV format (12 MB , 7/9/08)
Mapping50K_Xba240 Annotations, CSV format (12 MB , 7/9/08)
Mouse 5K Panel Annotations (293 KB, 6/15/06)
Rat I 5K Panel Annotations (293 KB, 6/15/06)
HuEx-1_0-st-v2 Transcript Cluster Annotations, CSV (17 MB , 7/17/08)
HuGene-1_0-st-v1 Transcript Cluster Annotations, CSV (11 MB , 7/17/08)
MoEx-1_0-st-v1 Transcript Cluster Annotations, CSV (16 MB , 7/17/08)
MoGene-1_0-st-v1 Transcript Cluster Annotations, CSV (9.9 MB, 7/17/08)
RaEx-1_0-st-v1 Transcript Cluster Annotations, CSV (14 MB , 7/17/08)
RaGene-1_0-st-v1 Transcript Cluster Annotations, CSV (6.2 MB, 7/17/08)
ATH1-121501 Annotations, CSV format (5.7 MB, 7/8/08)
Bovine Annotations, CSV format (5.1 MB, 7/8/08)
Canine Annotations, CSV format (3.6 MB, 7/8/08)
Canine_2 Annotations, CSV format (8.1 MB, 7/8/08)
Celegans Annotations, CSV format (4.3 MB, 7/8/08)
Chicken Annotations, CSV format (6.6 MB, 7/8/08)
Citrus Annotations, CSV format (2.2 MB, 7/8/08)
Cotton Annotations, CSV format (2.5 MB, 7/8/08)
DrosGenome1 Annotations, CSV format (4.9 MB, 7/8/08)
Drosophila_2 Annotations, CSV format (6.5 MB, 7/8/08)
E_coli_2 Annotations, CSV format (2.5 MB, 7/8/08)
Ecoli_ASv2 Annotations, CSV format (1.5 MB, 7/8/08)
HG-Focus Annotations, CSV format (4.7 MB, 7/8/08)
HG-U133A Annotations, CSV format (10 MB , 7/8/08)
HG-U133A_2 Annotations, CSV format (10 MB , 7/8/08)
HG-U133B Annotations, CSV format (7.7 MB, 7/8/08)
HG-U133_Plus_2 Annotations, CSV format (20 MB , 7/8/08)
HT_HG-U133A Annotations, CSV format (10 MB , 7/8/08)
HT_HG-U133B Annotations, CSV format (7.7 MB, 7/8/08)
HT_MG-430A Annotations, CSV format (9.2 MB, 7/8/08)
HT_MG-430B Annotations, CSV format (5.8 MB, 7/8/08)
HT_Rat-Focus Annotations, CSV format (7.5 MB, 7/8/08)
Hu35KsubA Annotations, CSV format (3.4 MB, 7/8/08)
Hu35KsubB Annotations, CSV format (2.2 MB, 7/8/08)
Hu35KsubC Annotations, CSV format (2.6 MB, 7/8/08)
Hu35KsubD Annotations, CSV format (2.7 MB, 7/8/08)
MOE430A Annotations, CSV format (9.3 MB, 7/8/08)
MOE430B Annotations, CSV format (5.8 MB, 7/8/08)
Maize Annotations, CSV format (2.5 MB, 7/8/08)
Medicago Annotations, CSV format (3.2 MB, 7/8/08)
Mouse430A_2 Annotations, CSV format (9.3 MB, 7/8/08)
Mouse430_2 Annotations, CSV format (15 MB , 7/8/08)
Mu19KsubA Annotations, CSV format (2.9 MB, 7/8/08)
Mu19KsubB Annotations, CSV format (3.0 MB, 7/8/08)
Mu19KsubC Annotations, CSV format (2.9 MB, 7/8/08)
Null S. cerevisiae Tiling 1.0R Annotations, CSV (139 KB, 5/22/06)
Pae_G1a Annotations, CSV format (539 KB, 7/8/08)
Plasmodium_Anopheles Annotations, CSV format (2.9 MB, 7/8/08)
Poplar Annotations, CSV format (5.0 MB, 7/8/08)
Porcine Annotations, CSV format (3.4 MB, 7/8/08)
RAE230A Annotations, CSV format (5.4 MB, 7/8/08)
RAE230B Annotations, CSV format (3.3 MB, 7/8/08)
Rat230_2 Annotations, CSV format (8.7 MB, 7/8/08)
RatToxFX Annotations, CSV format (818 KB, 7/8/08)
Rhesus Annotations, CSV format (8.3 MB, 7/8/08)
Rice Annotations, CSV format (7.0 MB, 7/8/08)
Soybean Annotations, CSV format (7.0 MB, 7/8/08)
Sugar_Cane Annotations, CSV format (1.8 MB, 7/8/08)
Test3 Annotations, CSV format (42 KB, 7/8/08)
Tomato Annotations, CSV format (1.4 MB, 7/8/08)
Vitis_Vinifera Annotations, CSV format (3.2 MB, 7/8/08)
Wheat Annotations, CSV format (7.3 MB, 7/8/08)
X_tropicalis Annotations, CSV format (8.9 MB, 7/8/08)
Xenopus_laevis Annotations, CSV format (2.6 MB, 7/8/08)
YG_S98 Annotations, CSV format (2.9 MB, 7/8/08)
Yeast_2 Annotations, CSV format (2.9 MB, 7/8/08)
Zebrafish Annotations, CSV format (3.5 MB, 7/8/08)
AG Annotations, CSV format (2.4 MB, 7/8/08)
Barley1 Annotations, CSV format (1.2 MB, 7/8/08)
Bsubtilis Annotations, CSV format (356 KB, 7/8/08)
Ecoli Annotations, CSV format (826 KB, 7/8/08)
HC_G110 Annotations, CSV format (982 KB, 7/8/08)
HG_U95A Annotations, CSV format (6.1 MB, 7/8/08)
HG_U95Av2 Annotations, CSV format (6.1 MB, 7/8/08)
HG_U95B Annotations, CSV format (4.1 MB, 7/8/08)
HG_U95C Annotations, CSV format (3.8 MB, 7/8/08)
HG_U95D Annotations, CSV format (2.9 MB, 7/8/08)
HG_U95E Annotations, CSV format (3.8 MB, 7/8/08)
Hu6800 Annotations, CSV format (3.6 MB, 7/8/08)
MG_U74Av2 Annotations, CSV format (5.5 MB, 7/8/08)
MG_U74Bv2 Annotations, CSV format (4.2 MB, 7/8/08)
MG_U74Cv2 Annotations, CSV format (3.1 MB, 7/8/08)
Mu11KsubA Annotations, CSV format (2.5 MB, 7/8/08)
Mu11KsubB Annotations, CSV format (2.7 MB, 7/8/08)
RG_U34A Annotations, CSV format (3.0 MB, 7/8/08)
RG_U34B Annotations, CSV format (1.8 MB, 7/8/08)
RG_U34C Annotations, CSV format (2.1 MB, 7/8/08)
RN_U34 Annotations, CSV format (613 KB, 7/8/08)
RT_U34 Annotations, CSV format (410 KB, 7/8/08)
S_aureus Annotations, CSV format (640 KB, 7/8/08)
U133_X3P Annotations, CSV format (19 MB , 7/8/08)
